Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiosulfate sulfurtransferase ynje | BEN53_RS09490 | Not Available | Negative | 1829761 - 1831068 | 48248.9 |
| atp-binding cassette domain-containing protein | BEN53_RS09495 | Not Available | Negative | 1831135 - 1831788 | 23903.0 |
| abc transporter permease | BEN53_RS09500 | Not Available | Negative | 1831788 - 1833323 | 56179.9 |
| abc transporter substrate-binding protein | BEN53_RS09505 | Not Available | Negative | 1833296 - 1834462 | 42963.9 |
| carboxymuconolactone decarboxylase family protein | BEN53_RS09510 | Not Available | Negative | 1834472 - 1835020 | 20598.1 |
| tvp38/tmem64 family protein | BEN53_RS09515 | Not Available | Negative | 1835020 - 1835727 | 26144.8 |
| lipoprotein ydjy | BEN53_RS09520 | Not Available | Negative | 1835742 - 1836419 | 24258.8 |
| tvp38/tmem64 family protein | BEN53_RS09525 | Not Available | Negative | 1836424 - 1837134 | 26098.8 |
| exodeoxyribonuclease iii | BEN53_RS09530 | Not Available | Negative | 1837301 - 1838107 | 30938.8 |
| succinylornithine/acetylornithine transaminase | BEN53_RS09540 | Not Available | Positive | 1838553 - 1839773 | 43534.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




