Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional nicotinamidase/pyrazinamidase | BEN53_RS09430 | Not Available | Negative | 1819222 - 1819863 | 23321.3 |
| asparaginase | BEN53_RS09435 | Not Available | Negative | 1819874 - 1820890 | 37129.5 |
| signal peptide peptidase sppa | BEN53_RS09440 | Not Available | Negative | 1821056 - 1822912 | 67204.9 |
| nad(p)h nitroreductase | BEN53_RS09450 | Not Available | Positive | 1823073 - 1823624 | 20059.2 |
| selenide, water dikinase seld | BEN53_RS09460 | Not Available | Positive | 1823741 - 1824784 | 36675.4 |
| dna topoisomerase iii | BEN53_RS09465 | Not Available | Positive | 1824789 - 1826744 | 73270.0 |
| nadp-specific glutamate dehydrogenase | BEN53_RS09470 | Not Available | Negative | 1826821 - 1828164 | 48572.2 |
| ynjh family protein | BEN53_RS09475 | Not Available | Positive | 1828400 - 1828672 | 9928.93 |
| ctp pyrophosphohydrolase | BEN53_RS09480 | Not Available | Negative | 1828638 - 1829045 | 15053.0 |
| cdp-alcohol phosphatidyltransferase family protein | BEN53_RS09485 | Not Available | Positive | 1829132 - 1829752 | 22597.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




