Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide-methionine (r)-s-oxide reductase msrb | BEN53_RS09380 | Not Available | Positive | 1809321 - 1809734 | 15452.0 |
| yeac family protein | BEN53_RS09385 | Not Available | Positive | 1809776 - 1810048 | 10254.4 |
| zinc-binding dehydrogenase | BEN53_RS09390 | Not Available | Positive | 1810418 - 1811494 | 38715.9 |
| mfs transporter | BEN53_RS09395 | Not Available | Positive | 1811521 - 1812900 | 49663.0 |
| nad(p)-dependent alcohol dehydrogenase | BEN53_RS09400 | Not Available | Positive | 1812917 - 1813960 | 37644.9 |
| ketose-bisphosphate aldolase | BEN53_RS09405 | Not Available | Positive | 1813981 - 1814817 | 30712.4 |
| sugar kinase | BEN53_RS09410 | Not Available | Positive | 1814822 - 1815769 | 34150.2 |
| nadh-dependent methylglyoxal reductase | BEN53_RS09415 | Not Available | Positive | 1815779 - 1816759 | 36327.9 |
| deor/glpr family dna-binding transcription regulator | BEN53_RS09420 | Not Available | Positive | 1816896 - 1817654 | 28252.0 |
| mfs transporter | BEN53_RS09425 | Not Available | Positive | 1817771 - 1819129 | 50203.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




