Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| small membrane protein yoai | BEN53_RS09330 | Not Available | Positive | 1797565 - 1797669 | 3771.77 |
| mischarged aminoacyl-trna deacylase | BEN53_RS09335 | Not Available | Negative | 1797670 - 1798173 | 17851.7 |
| diguanylate cyclase dgcj | BEN53_RS09340 | Not Available | Negative | 1798216 - 1799706 | 56633.8 |
| ggdef domain-containing protein | BEN53_RS09345 | Not Available | Negative | 1799887 - 1801362 | 55949.4 |
| yeah/yhbh family protein | BEN53_RS09350 | Not Available | Negative | 1801509 - 1802792 | 49490.3 |
| protein kinase yeag | BEN53_RS09355 | Not Available | Negative | 1802905 - 1804839 | 74484.3 |
| scaffolding protein mipa | BEN53_RS09360 | Not Available | Positive | 1805275 - 1806021 | 27832.4 |
| methylglyoxal reductase yeae | BEN53_RS09365 | Not Available | Positive | 1806111 - 1806965 | 30991.4 |
| d-hexose-6-phosphate mutarotase | BEN53_RS09370 | Not Available | Negative | 1807016 - 1807900 | 32657.8 |
| glyceraldehyde-3-phosphate dehydrogenase | BEN53_RS09375 | Not Available | Negative | 1807984 - 1808979 | 35534.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




