Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| slp family lipoprotein yeay | BEN53_RS09230 | Not Available | Positive | 1780990 - 1781571 | 20924.3 |
| long-chain-fatty-acid--coa ligase fadd | BEN53_RS09235 | Not Available | Positive | 1781776 - 1783461 | 62349.7 |
| ribonuclease d | BEN53_RS09240 | Not Available | Positive | 1783543 - 1784658 | 42200.0 |
| carnitine monooxygenase reductase subunit yeax | BEN53_RS09245 | Not Available | Negative | 1784712 - 1785677 | 35762.2 |
| carnitine monooxygenase, oxygenase subunit yeaw | BEN53_RS09250 | Not Available | Negative | 1785733 - 1786857 | 42595.0 |
| bcct family transporter yeav | BEN53_RS09255 | Not Available | Negative | 1786889 - 1788499 | 58673.4 |
| multifunctional d-malate/3-isopropylmalate/tartarate dehydrogenase | BEN53_RS09260 | Not Available | Negative | 1788750 - 1789835 | 40264.1 |
| dna-binding transcriptional regulator dmlr | BEN53_RS09265 | Not Available | Positive | 1789938 - 1790861 | 34655.8 |
| leucine efflux protein leue | BEN53_RS09270 | Not Available | Positive | 1790988 - 1791626 | 23259.0 |
| duf1971 domain-containing protein year | BEN53_RS09275 | Not Available | Positive | 1791799 - 1792158 | 13612.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




