Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2627 domain-containing protein | BEN53_RS09125 | Not Available | Positive | 1763932 - 1764075 | 5212.44 |
| transcription antiterminator/rna stability regulator cspe | BEN53_RS09130 | Not Available | Positive | 1764088 - 1764297 | 7402.76 |
| 23s rrna (guanine(745)-n(1))-methyltransferase | BEN53_RS09135 | Not Available | Positive | 1764463 - 1765272 | 30478.6 |
| manganese efflux pump mntp | BEN53_RS09140 | Not Available | Negative | 1765269 - 1765835 | 20118.3 |
| hypothetical protein | BEN53_RS27800 | Not Available | Negative | 1765832 - 1765954 | 4613.93 |
| duf986 family protein | BEN53_RS09150 | Not Available | Negative | 1766265 - 1766723 | 17602.3 |
| pts mannose transporter subunit iid | BEN53_RS09155 | Not Available | Negative | 1766778 - 1767629 | 30957.4 |
| pts mannose transporter subunit iic | BEN53_RS09160 | Not Available | Negative | 1767642 - 1768442 | 27637.6 |
| pts mannose transporter subunit iiab | BEN53_RS09165 | Not Available | Negative | 1768505 - 1769476 | 35049.6 |
| protein yoal | BEN53_RS27805 | Not Available | Positive | 1769793 - 1769951 | 6058.29 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




