Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane integrity lipid transport subunit yebs | BEN53_RS09070 | Not Available | Negative | 1753982 - 1755265 | 48246.3 |
| l-methionine (r)-s-oxide reductase | BEN53_RS09075 | Not Available | Positive | 1755395 - 1755892 | 18036.5 |
| rna chaperone proq | BEN53_RS09080 | Not Available | Positive | 1755989 - 1756687 | 25865.9 |
| carboxy terminal-processing peptidase | BEN53_RS09085 | Not Available | Positive | 1756707 - 1758755 | 76653.3 |
| protease htpx | BEN53_RS09090 | Not Available | Positive | 1758947 - 1759828 | 31959.3 |
| mfs transporter | BEN53_RS09095 | Not Available | Negative | 1759874 - 1761247 | 48124.7 |
| dna-binding transcriptional regulator kdgr | BEN53_RS09100 | Not Available | Positive | 1761424 - 1762215 | 30034.2 |
| yobh family protein | BEN53_RS09105 | Not Available | Negative | 1762359 - 1762598 | 8514.67 |
| phop/phoq regulator mgrb | BEN53_RS09110 | Not Available | Positive | 1762757 - 1762900 | 5552.09 |
| yebo family protein | BEN53_RS09115 | Not Available | Positive | 1762975 - 1763262 | 10887.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




