Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator hexr | BEN53_RS08970 | Not Available | Negative | 1734005 - 1734874 | 31959.3 |
| glucose-6-phosphate dehydrogenase | BEN53_RS08975 | Not Available | Positive | 1735212 - 1736687 | 55707.5 |
| phosphogluconate dehydratase | BEN53_RS08980 | Not Available | Positive | 1736922 - 1738733 | 64642.9 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | BEN53_RS08985 | Not Available | Positive | 1738770 - 1739411 | 22301.3 |
| formate-dependent phosphoribosylglycinamide formyltransferase | BEN53_RS08990 | Not Available | Negative | 1739467 - 1740645 | 42485.2 |
| dna damage-inducible protein yebg | BEN53_RS08995 | Not Available | Positive | 1740779 - 1741069 | 10717.5 |
| protein yebf | BEN53_RS09000 | Not Available | Positive | 1741136 - 1741492 | 12904.3 |
| tellurite resistance terb family protein | BEN53_RS09005 | Not Available | Positive | 1741818 - 1742477 | 23773.3 |
| oligopeptidase b | BEN53_RS09010 | Not Available | Positive | 1742684 - 1744744 | 79477.7 |
| exodeoxyribonuclease x | BEN53_RS09015 | Not Available | Negative | 1744741 - 1745403 | 25134.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




