Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar transcriptional regulator flhd | BEN53_RS08760 | Not Available | Positive | 1693051 - 1693401 | 13317.2 |
| flagellar transcriptional regulator flhc | BEN53_RS08765 | Not Available | Positive | 1693404 - 1693982 | 21553.3 |
| flagellar motor stator protein mota | BEN53_RS08770 | Not Available | Positive | 1694109 - 1694996 | 31999.4 |
| flagellar motor protein motb | BEN53_RS08775 | Not Available | Positive | 1694993 - 1695919 | 34157.1 |
| chemotaxis protein chea | BEN53_RS08780 | Not Available | Positive | 1695924 - 1697888 | 71482.7 |
| chemotaxis protein chew | BEN53_RS08785 | Not Available | Positive | 1697909 - 1698412 | 18084.9 |
| methyl-accepting chemotaxis protein ii | BEN53_RS08790 | Not Available | Positive | 1698557 - 1700218 | 59921.1 |
| methyl-accepting chemotaxis protein iv | BEN53_RS08795 | Not Available | Positive | 1700264 - 1701865 | 57590.2 |
| protein-glutamate o-methyltransferase cher | BEN53_RS08800 | Not Available | Positive | 1701884 - 1702744 | 32909.4 |
| protein-glutamate methylesterase/protein glutamine deamidase | BEN53_RS08805 | Not Available | Positive | 1702747 - 1703796 | 37455.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




