Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yecr-like lipofamily protein | BEN53_RS08700 | Not Available | Negative | 1683480 - 1683803 | 11775.2 |
| stress response protein azuc | BEN53_RS27120 | Not Available | Positive | 1684066 - 1684152 | 3408.36 |
| duf2766 family protein yecj | BEN53_RS08715 | Not Available | Positive | 1684267 - 1684518 | 9146.15 |
| non-heme ferritin-like protein | BEN53_RS08720 | Not Available | Negative | 1684597 - 1685100 | 18895.6 |
| arabinose abc transporter substrate-binding protein araf | BEN53_RS08730 | Not Available | Positive | 1685896 - 1686885 | 35542.9 |
| arabinose abc transporter atp-binding protein arag | BEN53_RS08735 | Not Available | Positive | 1686955 - 1688469 | 55021.6 |
| arabinose abc transporter permease arah | BEN53_RS08740 | Not Available | Positive | 1688484 - 1689470 | 34213.1 |
| trehalose-phosphatase | BEN53_RS08745 | Not Available | Positive | 1689637 - 1690437 | 29091.9 |
| alpha,alpha-trehalose-phosphate synthase | BEN53_RS08750 | Not Available | Positive | 1690412 - 1691836 | 53614.1 |
| universal stress protein uspc | BEN53_RS08755 | Not Available | Negative | 1691843 - 1692271 | 15644.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




