Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar basal-body ms-ring/collar protein flif | BEN53_RS08545 | Not Available | Negative | 1659301 - 1660959 | 60590.6 |
| flagellar hook-basal body complex protein flie | BEN53_RS08550 | Not Available | Positive | 1661174 - 1661488 | 11127.5 |
| sos response-associated peptidase | BEN53_RS08560 | Not Available | Negative | 1661893 - 1662561 | 25009.5 |
| sulfurtransferase-like selenium metabolism protein yedf | BEN53_RS08565 | Not Available | Negative | 1662668 - 1662901 | 8639.5 |
| selenium metabolism membrane protein yede/fdht | BEN53_RS08570 | Not Available | Negative | 1662898 - 1664103 | 44475.6 |
| lipoprotein yedd | BEN53_RS08580 | Not Available | Positive | 1664290 - 1664703 | 15002.1 |
| alpha-amylase | BEN53_RS08585 | Not Available | Negative | 1664737 - 1666224 | 56619.2 |
| flagella biosynthesis regulatory protein flit | BEN53_RS08590 | Not Available | Negative | 1666302 - 1666667 | 13786.6 |
| flagellar export chaperone flis | BEN53_RS08595 | Not Available | Negative | 1666667 - 1667077 | 15020.1 |
| flagellar filament capping protein flid | BEN53_RS08600 | Not Available | Negative | 1667093 - 1668508 | 48903.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




