Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6387 family protein | BEN53_RS08225 | Not Available | Positive | 1609942 - 1610778 | 32543.0 |
| helix-turn-helix transcriptional regulator | BEN53_RS08230 | Not Available | Positive | 1610994 - 1611212 | 8428.07 |
| hypothetical protein | BEN53_RS08235 | Not Available | Positive | 1611294 - 1611584 | 12069.3 |
| hypothetical protein | BEN53_RS08240 | Not Available | Positive | 1611629 - 1611925 | 11378.0 |
| hypothetical protein | BEN53_RS08245 | Not Available | Positive | 1611999 - 1612241 | 9745.98 |
| duf6404 family protein | BEN53_RS08250 | Not Available | Positive | 1612346 - 1612696 | 13160.3 |
| h-ns family nucleoid-associated regulatory protein | BEN53_RS08255 | Not Available | Negative | 1612760 - 1613164 | 15013.6 |
| duf4756 family protein | BEN53_RS08260 | Not Available | Negative | 1613322 - 1613801 | 18717.3 |
| replication/maintenance protein repl | BEN53_RS08265 | Not Available | Negative | 1613956 - 1614501 | 20856.3 |
| hypothetical protein | BEN53_RS08270 | Not Available | Positive | 1615416 - 1615640 | 8626.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




