Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dctp deaminase | BEN53_RS07475 | Not Available | Positive | 1455611 - 1456192 | 21252.4 |
| outer membrane assembly protein asma | BEN53_RS07480 | Not Available | Positive | 1456214 - 1458067 | 69036.1 |
| helix-turn-helix domain-containing protein | BEN53_RS07485 | Not Available | Negative | 1458120 - 1458410 | 10791.0 |
| type ii toxin-antitoxin system rele/pare family toxin | BEN53_RS07490 | Not Available | Negative | 1458400 - 1458738 | 13251.7 |
| terc family protein | BEN53_RS07495 | Not Available | Negative | 1458813 - 1460396 | 59511.9 |
| hypothetical protein | BEN53_RS27300 | Not Available | Negative | 1460597 - 1460746 | 5342.57 |
| polysaccharide export protein wza | BEN53_RS07500 | Not Available | Positive | 1461055 - 1462194 | 41912.4 |
| low molecular weight protein-tyrosine-phosphatase wzb | BEN53_RS07505 | Not Available | Positive | 1462200 - 1462643 | 16710.2 |
| tyrosine-protein kinase wzc | BEN53_RS07510 | Not Available | Positive | 1462646 - 1464808 | 79384.8 |
| colanic acid biosynthesis glycosyltransferase wcaa | BEN53_RS07515 | Not Available | Positive | 1464901 - 1465740 | 33063.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




