Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tagatose-bisphosphate aldolase subunit gatz | BEN53_RS07315 | Not Available | Positive | 1422453 - 1423715 | 46847.2 |
| pts galactitol transporter subunit iia | BEN53_RS07320 | Not Available | Positive | 1423725 - 1424177 | 16908.4 |
| pts galactitol transporter subunit iib | BEN53_RS07325 | Not Available | Positive | 1424208 - 1424492 | 10194.6 |
| pts galactitol transporter subunit iic | BEN53_RS07330 | Not Available | Positive | 1424496 - 1425851 | 48340.1 |
| galactitol-1-phosphate 5-dehydrogenase | BEN53_RS07335 | Not Available | Positive | 1425899 - 1426939 | 37404.3 |
| deor/glpr family dna-binding transcription regulator | BEN53_RS07340 | Not Available | Positive | 1427045 - 1427818 | 27728.6 |
| lipid kinase yegs | BEN53_RS07345 | Not Available | Negative | 1427900 - 1428799 | 31989.6 |
| protein yegr | BEN53_RS07350 | Not Available | Positive | 1429215 - 1429532 | 11420.9 |
| trna 5-hydroxyuridine modification protein yegq | BEN53_RS07360 | Not Available | Negative | 1429862 - 1431223 | 51182.1 |
| type ii toxin-antitoxin system rele/pare family toxin | BEN53_RS07365 | Not Available | Negative | 1431326 - 1431622 | 11586.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




