Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4132 domain-containing protein | BEN53_RS07155 | Not Available | Negative | 1387052 - 1390846 | 141260.0 |
| duf4132 domain-containing protein | BEN53_RS07160 | Not Available | Negative | 1390859 - 1394659 | 143485.0 |
| methionine--trna ligase | BEN53_RS07165 | Not Available | Negative | 1394800 - 1396833 | 76244.9 |
| iron-sulfur cluster carrier protein apbc | BEN53_RS07170 | Not Available | Positive | 1396965 - 1398074 | 39940.4 |
| yehe family protein | BEN53_RS07175 | Not Available | Positive | 1398337 - 1398618 | 10152.2 |
| fimbrial protein | BEN53_RS07185 | Not Available | Positive | 1398914 - 1399456 | 19075.6 |
| fimbria/pilus periplasmic chaperone | BEN53_RS07190 | Not Available | Positive | 1399537 - 1400211 | 24853.3 |
| fimbrial biogenesis outer membrane usher protein | BEN53_RS07195 | Not Available | Positive | 1400227 - 1402707 | 92238.0 |
| putative fimbrial-like adhesin protein | BEN53_RS07200 | Not Available | Positive | 1402723 - 1403757 | 36903.9 |
| ni(ii)/co(ii) efflux transporter accessory subunit rcnb | BEN53_RS07205 | Not Available | Negative | 1403839 - 1404177 | 12466.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




