Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s6--l-glutamate ligase | BEN53_RS06880 | Not Available | Positive | 1329665 - 1330567 | 32438.5 |
| ybjn domain-containing protein | BEN53_RS06885 | Not Available | Positive | 1330655 - 1331131 | 17667.1 |
| spermidine/putrescine abc transporter substrate-binding protein potf | BEN53_RS06895 | Not Available | Positive | 1331482 - 1332594 | 40927.8 |
| putrescine abc transporter atp-binding subunit potg | BEN53_RS06900 | Not Available | Positive | 1332689 - 1333822 | 41981.4 |
| putrescine abc transporter permease poth | BEN53_RS06905 | Not Available | Positive | 1333832 - 1334785 | 35456.7 |
| putrescine abc transporter permease poti | BEN53_RS06910 | Not Available | Positive | 1334782 - 1335627 | 30572.5 |
| ybjo family protein | BEN53_RS06915 | Not Available | Positive | 1335687 - 1336175 | 18519.1 |
| 23s rrna (uracil(747)-c(5))-methyltransferase rlmc | BEN53_RS06920 | Not Available | Positive | 1336216 - 1337343 | 41912.0 |
| arginine abc transporter substrate-binding protein artj | BEN53_RS06925 | Not Available | Negative | 1337372 - 1338103 | 26857.9 |
| arginine abc transporter permease artm | BEN53_RS06930 | Not Available | Negative | 1338329 - 1338997 | 24915.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




