Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Baseplate j-like protein | BEN53_RS24980 | Not Available | Negative | 4925162 - 4926277 | 40283.1 |
| Putative baseplate assembly protein with lysozyme | BEN53_RS24985 | Not Available | Negative | 4926268 - 4926627 | 13971.8 |
| Baseplate protein | BEN53_RS24990 | Not Available | Negative | 4926726 - 4927427 | 24791.0 |
| Tail protein | BEN53_RS24995 | Not Available | Negative | 4927437 - 4928477 | 38153.1 |
| Gp20, phage tail protein x | BEN53_RS25000 | Not Available | Negative | 4928465 - 4928674 | 7972.63 |
| Gp19 | BEN53_RS25005 | Not Available | Negative | 4928674 - 4929627 | 35125.2 |
| Bacteriophage tail protein gpt | BEN53_RS25010 | Not Available | Negative | 4929627 - 4932002 | 85517.3 |
| gpe family phage tail protein | BEN53_RS27920 | Not Available | Negative | 4932104 - 4932232 | 4891.65 |
| Gp15 | BEN53_RS25020 | Not Available | Negative | 4932192 - 4932509 | 11825.3 |
| Gp14, phage major tail tube protein | BEN53_RS25025 | Not Available | Negative | 4932560 - 4933084 | 19453.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




