Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dethiobiotin synthase | BEN53_RS06470 | Not Available | Positive | 1247924 - 1248601 | 24105.9 |
| excinuclease abc subunit uvrb | BEN53_RS06475 | Not Available | Positive | 1249180 - 1251201 | 76216.6 |
| uridine diphosphate-n-acetylglucosamine-binding protein yvck | BEN53_RS06480 | Not Available | Negative | 1251239 - 1252147 | 32691.9 |
| gtp 3',8-cyclase moaa | BEN53_RS06485 | Not Available | Positive | 1252544 - 1253533 | 37306.5 |
| molybdenum cofactor biosynthesis protein b | BEN53_RS06490 | Not Available | Positive | 1253555 - 1254067 | 18666.1 |
| cyclic pyranopterin monophosphate synthase moac | BEN53_RS06495 | Not Available | Positive | 1254070 - 1254555 | 17482.3 |
| molybdopterin synthase sulfur carrier subunit | BEN53_RS06500 | Not Available | Positive | 1254548 - 1254793 | 8740.36 |
| molybdopterin synthase catalytic subunit moae | BEN53_RS06505 | Not Available | Positive | 1254795 - 1255247 | 16996.0 |
| bax inhibitor-1/ycca family protein | BEN53_RS06510 | Not Available | Positive | 1255384 - 1256088 | 25937.5 |
| bax inhibitor-1/ycca family protein | BEN53_RS06520 | Not Available | Positive | 1256296 - 1257009 | 26100.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




