Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| galactose-1-phosphate uridylyltransferase | BEN53_RS06365 | Not Available | Negative | 1225799 - 1226845 | 39654.7 |
| udp-glucose 4-epimerase gale | BEN53_RS06370 | Not Available | Negative | 1226855 - 1227871 | 37240.2 |
| molybdate abc transporter atp-binding protein modf | BEN53_RS06375 | Not Available | Negative | 1228133 - 1229605 | 54572.1 |
| molybdenum-dependent transcriptional regulator | BEN53_RS06380 | Not Available | Negative | 1229673 - 1230461 | 28282.9 |
| multidrug efflux pump accessory protein acrz | BEN53_RS06385 | Not Available | Positive | 1230590 - 1230739 | 5300.82 |
| molybdate abc transporter substrate-binding protein | BEN53_RS06395 | Not Available | Positive | 1230906 - 1231679 | 27415.5 |
| molybdate abc transporter permease subunit | BEN53_RS06400 | Not Available | Positive | 1231679 - 1232368 | 24906.3 |
| molybdenum abc transporter atp-binding protein modc | BEN53_RS06405 | Not Available | Positive | 1232371 - 1233429 | 39074.8 |
| bifunctional pyridoxal phosphate/fructose-1,6-bisphosphate phosphatase | BEN53_RS06410 | Not Available | Negative | 1233430 - 1234248 | 30232.0 |
| 6-phosphogluconolactonase | BEN53_RS06415 | Not Available | Positive | 1234403 - 1235398 | 36323.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




