Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Pf10979 family protein | BEN53_RS17280 | Not Available | Positive | 3399956 - 3400639 | 25809.8 |
| hypothetical protein | BEN53_RS17285 | Not Available | Positive | 3400636 - 3400866 | 8566.41 |
| hypothetical protein | BEN53_RS17290 | Not Available | Positive | 3400856 - 3401071 | 8133.63 |
| Gp33 | BEN53_RS17295 | Not Available | Positive | 3401064 - 3401513 | 16866.6 |
| Gp01 | BEN53_RS17300 | Not Available | Positive | 3401485 - 3401883 | 15520.5 |
| Hypothetical protein | BEN53_RS24955 | Not Available | Positive | 4920908 - 4921699 | 30392.5 |
| Enoyl-coa hydratase/carnithine racemase-like protein | BEN53_RS24960 | Not Available | Negative | 4921714 - 4922169 | 17764.4 |
| Tail fibers protein | BEN53_RS24965 | Not Available | Negative | 4922166 - 4922873 | 26676.1 |
| Tail fiber protein | BEN53_RS24970 | Not Available | Negative | 4922870 - 4924450 | 54965.5 |
| Gp25, tail fiber | BEN53_RS24975 | Not Available | Negative | 4924453 - 4925169 | 26881.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




