Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fur leader peptide | BEN53_RS05900 | Not Available | Negative | 1137650 - 1137736 | 3108.72 |
| flavodoxin flda | BEN53_RS05905 | Not Available | Negative | 1137946 - 1138476 | 19737.9 |
| lexa regulated protein | BEN53_RS05910 | Not Available | Negative | 1138616 - 1138909 | 11280.7 |
| esterase | BEN53_RS05915 | Not Available | Negative | 1139049 - 1139813 | 28478.9 |
| replication initiation negative regulator seqa | BEN53_RS05920 | Not Available | Positive | 1139998 - 1140543 | 20316.6 |
| phosphoglucomutase (alpha-d-glucose-1,6-bisphosphate-dependent) | BEN53_RS05925 | Not Available | Positive | 1140569 - 1142209 | 58392.2 |
| putrescine-ornithine antiporter | BEN53_RS05930 | Not Available | Negative | 1142266 - 1143585 | 46480.6 |
| ornithine decarboxylase spef | BEN53_RS05935 | Not Available | Negative | 1143582 - 1145780 | 82505.4 |
| leader peptide spefl | BEN53_RS27415 | Not Available | Negative | 1146038 - 1146142 | 4249.08 |
| two-component system response regulator kdpe | BEN53_RS05945 | Not Available | Negative | 1146376 - 1147053 | 25363.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




