Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asparagine synthase b | BEN53_RS05845 | Not Available | Negative | 1124800 - 1126464 | 62662.3 |
| ribonucleotide monophosphatase nagd | BEN53_RS05855 | Not Available | Negative | 1126721 - 1127473 | 27164.6 |
| dna-binding transcriptional regulator nagc | BEN53_RS05860 | Not Available | Negative | 1127521 - 1128741 | 44544.0 |
| n-acetylglucosamine-6-phosphate deacetylase | BEN53_RS05865 | Not Available | Negative | 1128750 - 1129898 | 40979.5 |
| glucosamine-6-phosphate deaminase | BEN53_RS05870 | Not Available | Negative | 1129958 - 1130758 | 29790.0 |
| pts n-acetyl glucosamine transporter subunit iiabc | BEN53_RS05875 | Not Available | Positive | 1131092 - 1133038 | 68392.0 |
| glutamine--trna ligase | BEN53_RS05880 | Not Available | Positive | 1133241 - 1134905 | 63511.3 |
| chitoporin chip | BEN53_RS05885 | Not Available | Positive | 1135345 - 1136751 | 52714.8 |
| chiq/ybfn family lipoprotein | BEN53_RS05890 | Not Available | Positive | 1136801 - 1137127 | 12027.3 |
| ferric iron uptake transcriptional regulator | BEN53_RS05895 | Not Available | Negative | 1137211 - 1137657 | 16795.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




