Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Gp41 | BEN53_RS17235 | Not Available | Positive | 3394057 - 3394974 | 34099.6 |
| hypothetical protein | BEN53_RS17240 | Not Available | Positive | 3394974 - 3395291 | 11564.2 |
| Attr | Not Available | Not Available | Positive | 3395272 - 3395283 | Not Available |
| Integrase core domain protein | BEN53_RS17245 | Not Available | Positive | 3395307 - 3397076 | 64495.7 |
| Putative transposase b subunit | BEN53_RS17250 | Not Available | Positive | 3397087 - 3398253 | 42854.9 |
| hypothetical protein | BEN53_RS17255 | Not Available | Positive | 3398256 - 3398525 | 10124.3 |
| Host nuclease inhibitor protein | BEN53_RS17260 | Not Available | Positive | 3398553 - 3399083 | 19754.7 |
| hypothetical protein | BEN53_RS27900 | Not Available | Positive | 3399181 - 3399375 | 7316.9 |
| hypothetical protein | BEN53_RS17270 | Not Available | Positive | 3399372 - 3399644 | 10140.2 |
| 1_nc_021802: nucleoside triphosphate pyrophosphohydrolase | BEN53_RS17275 | Not Available | Positive | 3399654 - 3399959 | 11251.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




