Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrimidine-specific ribonucleoside hydrolase riha | BEN53_RS05740 | Not Available | Negative | 1109461 - 1110396 | 33806.8 |
| glutamate/aspartate abc transporter atp-binding protein gltl | BEN53_RS05745 | Not Available | Negative | 1110514 - 1111239 | 26661.7 |
| glutamate/aspartate abc transporter permease gltk | BEN53_RS05750 | Not Available | Negative | 1111239 - 1111913 | 24958.3 |
| glutamate/aspartate abc transporter permease gltj | BEN53_RS05755 | Not Available | Negative | 1111913 - 1112653 | 27456.2 |
| glutamate/aspartate abc transporter substrate-binding protein glti | BEN53_RS05760 | Not Available | Negative | 1112823 - 1113731 | 33422.9 |
| rhomboid family intramembrane serine protease | BEN53_RS05765 | Not Available | Positive | 1114185 - 1116062 | 67442.8 |
| apolipoprotein n-acyltransferase | BEN53_RS05770 | Not Available | Negative | 1116195 - 1117736 | 57265.4 |
| cnnm family magnesium/cobalt transport protein corc | BEN53_RS05775 | Not Available | Negative | 1117761 - 1118639 | 33300.4 |
| rrna maturation rnase ybey | BEN53_RS05780 | Not Available | Negative | 1118729 - 1119196 | 17526.6 |
| phoh family protein | BEN53_RS05785 | Not Available | Negative | 1119193 - 1120233 | 39041.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




