Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ybdk family carboxylate-amine ligase | BEN53_RS05360 | Not Available | Negative | 1035336 - 1036454 | 41579.6 |
| hypothetical protein | BEN53_RS27880 | Not Available | Negative | 1036668 - 1036936 | 9814.89 |
| type i toxin-antitoxin system toxin hoke | BEN53_RS05375 | Not Available | Positive | 1036905 - 1037057 | 5592.11 |
| enterobactin synthase subunit entd | BEN53_RS05380 | Not Available | Negative | 1037179 - 1037799 | 23186.9 |
| siderophore enterobactin receptor fepa | BEN53_RS05385 | Not Available | Negative | 1037849 - 1040089 | 82126.3 |
| enterochelin esterase | BEN53_RS05390 | Not Available | Positive | 1040332 - 1041534 | 45513.9 |
| enterobactin biosynthesis protein ybdz | BEN53_RS05395 | Not Available | Positive | 1041537 - 1041755 | 8341.73 |
| enterobactin non-ribosomal peptide synthetase entf | BEN53_RS05400 | Not Available | Positive | 1041752 - 1045633 | 142154.0 |
| lps o-antigen length regulator wzz(fepe) | BEN53_RS05405 | Not Available | Positive | 1045848 - 1046981 | 42163.8 |
| iron-enterobactin abc transporter atp-binding protein | BEN53_RS05410 | Not Available | Negative | 1046978 - 1047793 | 29812.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




