Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | BEN53_RS05245 | Not Available | Negative | 1010999 - 1011667 | 24518.5 |
| hypothetical protein | BEN53_RS27555 | Not Available | Negative | 1011742 - 1011822 | 3021.75 |
| hypothetical protein | BEN53_RS27560 | Not Available | Positive | 1011817 - 1012022 | 7708.61 |
| alpha/beta hydrolase | BEN53_RS05255 | Not Available | Negative | 1012206 - 1013690 | 54972.1 |
| omptin family outer membrane protease ompt | BEN53_RS05260 | Not Available | Negative | 1013877 - 1014830 | 35491.1 |
| dna-binding transcriptional regulator envy | BEN53_RS05275 | Not Available | Negative | 1015343 - 1016104 | 29006.5 |
| duf4434 family protein | BEN53_RS05285 | Not Available | Negative | 1016287 - 1017177 | 33046.5 |
| bacteriophage adsorption protein nfra | BEN53_RS05290 | Not Available | Negative | 1017178 - 1020150 | 111415.0 |
| cyclic di-3',5'-guanylate-activated glycosyltransferase nrfb | BEN53_RS05295 | Not Available | Negative | 1020137 - 1022374 | 85324.3 |
| cu(+)/ag(+) sensor histidine kinase cuss | BEN53_RS05300 | Not Available | Negative | 1022524 - 1023966 | 53732.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




