Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| smda family multidrug abc transporter permease/atp-binding protein | BEN53_RS04450 | Not Available | Positive | 875148 - 876920 | 66026.3 |
| smdb family multidrug efflux abc transporter permease/atp-binding protein | BEN53_RS04455 | Not Available | Positive | 876913 - 878694 | 65272.6 |
| p-ii family nitrogen regulator | BEN53_RS04460 | Not Available | Positive | 878875 - 879213 | 12259.9 |
| ammonium transporter amtb | BEN53_RS04465 | Not Available | Positive | 879243 - 880529 | 44517.4 |
| acyl-coa thioesterase ii | BEN53_RS04470 | Not Available | Negative | 880578 - 881438 | 31968.1 |
| ybay family lipoprotein | BEN53_RS04475 | Not Available | Positive | 881656 - 882228 | 19442.3 |
| mgmt family protein | BEN53_RS04480 | Not Available | Negative | 882259 - 882570 | 11488.8 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 882733 - 882829 | Not Available |
| duf1428 domain-containing protein | BEN53_RS04490 | Not Available | Positive | 882949 - 883302 | 13318.9 |
| cyclic-guanylate-specific phosphodiesterase pdeb | BEN53_RS04495 | Not Available | Negative | 883344 - 884894 | 58723.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




