Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SD134209 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
51296 bp
Thymine Count
49871 bp
Guanine Count
44399 bp
Cytosine Count
42776 bp
Genome Length
188342 bp
Protein-coding Genes
203 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| repb family plasmid replication initiator protein | DL800_RS00005 | Not Available | Positive | 1 - 876 | 33191.1 |
| hypothetical protein | DL800_RS30305 | Not Available | Negative | 1323 - 1667 | 13299.1 |
| hypothetical protein | DL800_RS00015 | Not Available | Positive | 2318 - 2671 | 12409.5 |
| type iv conjugative transfer system protein tral | DL800_RS00020 | Not Available | Positive | 2723 - 3040 | 12437.2 |
| trae/trak family type iv conjugative transfer system protein | DL800_RS00025 | Not Available | Positive | 3052 - 3837 | 29235.2 |
| type-f conjugative transfer system secretin trak | DL800_RS00030 | Not Available | Positive | 3840 - 5072 | 44416.4 |
| plasmid transfer protein htdo | DL800_RS00035 | Not Available | Positive | 5074 - 5514 | 16397.5 |
| inchi-type conjugal transfer protein trhb | DL800_RS00040 | Not Available | Positive | 5504 - 6862 | 48349.6 |
| hypothetical protein | DL800_RS00045 | Not Available | Positive | 6871 - 7383 | 19023.8 |
| protein-disulfide isomerase htdt | DL800_RS00050 | Not Available | Positive | 7489 - 8241 | 28000.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





