Escherichia coli strain SD134209

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain SD134209 is a Gram-negative, rod-shaped bacterium that commonly exists in host-associated environments, demonstrating a versatile adaptability as a facultative anaerobe. This strain is characterized by its ability to thrive optimally at 37.0°C, a temperature that aligns with the physiological conditions found within mammalian hosts. Observations of its cellular arrangement reveal that E. coli SD134209 can be found in both pairs and singles, which may influence its interactions within the host microbiome and contribute to its ecological role. As a facultative anaerobe, this strain can utilize both aerobic and anaerobic metabolic pathways, providing it with a competitive advantage in a variety of environments, including the gastrointestinal tracts of mammals. This metabolic flexibility allows E. coli SD134209 to adapt to fluctuating oxygen levels, which is a common characteristic of the gut environment. The ecological implications of E. coli SD134209 suggest its potential involvement in complex microbial communities within the host, where it may play a role in nutrient cycling and maintaining gut homeostasis. Its ability to thrive in different arrangements and conditions might facilitate interactions with other microbial species, affecting overall gut health and function. Understanding the specific traits of this strain can provide insights into its contributions to host-associated microbiomes and its adaptive strategies in varied ecological niches.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain SD134209

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain SD134209
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain SD134209


Gene Summary

Adenine Count

51296 bp

Thymine Count

49871 bp

Guanine Count

44399 bp

Cytosine Count

42776 bp

Genome Length

188342 bp

Protein-coding Genes

203 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
repb family plasmid replication initiator proteinDL800_RS00005Not Available+1 - 87633191.1
hypothetical proteinDL800_RS30305Not Available-1323 - 166713299.1
hypothetical proteinDL800_RS00015Not Available+2318 - 267112409.5
type iv conjugative transfer system protein tralDL800_RS00020Not Available+2723 - 304012437.2
trae/trak family type iv conjugative transfer system proteinDL800_RS00025Not Available+3052 - 383729235.2
type-f conjugative transfer system secretin trakDL800_RS00030Not Available+3840 - 507244416.4
plasmid transfer protein htdoDL800_RS00035Not Available+5074 - 551416397.5
inchi-type conjugal transfer protein trhbDL800_RS00040Not Available+5504 - 686248349.6
hypothetical proteinDL800_RS00045Not Available+6871 - 738319023.8
protein-disulfide isomerase htdtDL800_RS00050Not Available+7489 - 824128000.0

Displaying genes 1 – 10 of 203 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites