Actinosynnema pretiosum subsp. pretiosum strain ATCC 31280

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Actinosynnema

Description

Actinosynnema pretiosum subsp. pretiosum strain ATCC 31280 is characterized by having a single replicon, which is a significant trait for its genetic stability and metabolic processes. The strain is documented under the accession number NZ_CP029607.1, providing a reference for researchers looking to access its genomic information. This strain is part of the Actinosynnema genus, which is known for producing bioactive compounds, including antibiotics. The genetic makeup indicated by its single replicon may suggest streamlined metabolic pathways, potentially facilitating efficient synthesis of secondary metabolites. The ecological role of Actinosynnema pretiosum subsp. pretiosum in its natural habitat likely involves interactions with other microorganisms and contributing to the soil microbiome's health, although specific ecological interactions are not detailed. Overall, the unique traits of Actinosynnema pretiosum subsp. pretiosum strain ATCC 31280 highlight its potential significance in biotechnology and pharmacology, particularly for antibiotic development and understanding microbial interactions in ecosystems. Further research could elucidate its specific contributions to microbial ecology and bioprospecting efforts.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusActinosynnema
SpeciesActinosynnema pretiosum
Strainsubsp. pretiosum strain ATCC 31280

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Actinosynnema pretiosum subsp. pretiosum strain ATCC 31280

Gene Summary

Adenine Count

1099026 bp

Thymine Count

1099016 bp

Guanine Count

3067283 bp

Cytosine Count

3074941 bp

Genome Length

8340266 bp

Protein-coding Genes

7159 genes

Non-Coding Genes

111 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sdr family oxidoreductaseAPASM_RS17165Not AvailablePositive3988505 - 398943132610.4
4-oxalocrotonate tautomerase family proteinAPASM_RS17170Not AvailablePositive3989472 - 39896787108.48
dihydrofolate reductase family proteinAPASM_RS17175Not AvailableNegative3989723 - 399026819632.7
nucleotide exchange factor grpeAPASM_RS17180Not AvailableNegative3990351 - 399096721467.5
sensor histidine kinaseAPASM_RS17185Not AvailableNegative3991019 - 399220040774.5
alpha/beta hydrolaseAPASM_RS17190Not AvailablePositive3992357 - 399381151731.3
serine hydrolaseAPASM_RS17195Not AvailableNegative3993883 - 399517245156.0
duf3887 domain-containing proteinAPASM_RS17200Not AvailableNegative3995191 - 399571818761.4
spoiie family protein phosphataseAPASM_RS17205Not AvailableNegative3996177 - 399661715827.7
hypothetical proteinAPASM_RS38755Not AvailableNegative3996898 - 39971378458.02

Displaying genes 3491 – 3500 of 7270 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.