Actinosynnema pretiosum subsp. pretiosum strain ATCC 31280

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Actinosynnema

Description

Actinosynnema pretiosum subsp. pretiosum strain ATCC 31280 is characterized by having a single replicon, which is a significant trait for its genetic stability and metabolic processes. The strain is documented under the accession number NZ_CP029607.1, providing a reference for researchers looking to access its genomic information. This strain is part of the Actinosynnema genus, which is known for producing bioactive compounds, including antibiotics. The genetic makeup indicated by its single replicon may suggest streamlined metabolic pathways, potentially facilitating efficient synthesis of secondary metabolites. The ecological role of Actinosynnema pretiosum subsp. pretiosum in its natural habitat likely involves interactions with other microorganisms and contributing to the soil microbiome's health, although specific ecological interactions are not detailed. Overall, the unique traits of Actinosynnema pretiosum subsp. pretiosum strain ATCC 31280 highlight its potential significance in biotechnology and pharmacology, particularly for antibiotic development and understanding microbial interactions in ecosystems. Further research could elucidate its specific contributions to microbial ecology and bioprospecting efforts.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusActinosynnema
SpeciesActinosynnema pretiosum
Strainsubsp. pretiosum strain ATCC 31280

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Actinosynnema pretiosum subsp. pretiosum strain ATCC 31280

Gene Summary

Adenine Count

1099026 bp

Thymine Count

1099016 bp

Guanine Count

3067283 bp

Cytosine Count

3074941 bp

Genome Length

8340266 bp

Protein-coding Genes

7159 genes

Non-Coding Genes

111 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ferredoxinAPASM_RS14060Not AvailablePositive3158718 - 31589608291.72
type i polyketide synthaseAPASM_RS37610Not AvailablePositive3159059 - 316121274802.9
nucleotide exchange factor grpeAPASM_RS39685Not AvailablePositive3161122 - 316243246171.4
nucleotide exchange factor grpeAPASM_RS39690Not AvailablePositive3162537 - 316403651361.6
type i polyketide synthaseAPASM_RS14070Not AvailablePositive3164423 - 3180382551268.0
helix-turn-helix transcriptional regulatorAPASM_RS14075Not AvailablePositive3180760 - 318355599452.8
abc transporter atp-binding proteinAPASM_RS14080Not AvailablePositive3183804 - 318464329939.8
ftsx-like permease family proteinAPASM_RS14085Not AvailablePositive3184643 - 318721089041.4
response regulator transcription factorAPASM_RS14090Not AvailableNegative3187738 - 318841824550.7
sensor histidine kinaseAPASM_RS39695Not AvailableNegative3188382 - 318967145877.7

Displaying genes 2881 – 2890 of 7270 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.