Actinosynnema pretiosum subsp. pretiosum strain ATCC 31280

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Actinosynnema

Description

Actinosynnema pretiosum subsp. pretiosum strain ATCC 31280 is characterized by having a single replicon, which is a significant trait for its genetic stability and metabolic processes. The strain is documented under the accession number NZ_CP029607.1, providing a reference for researchers looking to access its genomic information. This strain is part of the Actinosynnema genus, which is known for producing bioactive compounds, including antibiotics. The genetic makeup indicated by its single replicon may suggest streamlined metabolic pathways, potentially facilitating efficient synthesis of secondary metabolites. The ecological role of Actinosynnema pretiosum subsp. pretiosum in its natural habitat likely involves interactions with other microorganisms and contributing to the soil microbiome's health, although specific ecological interactions are not detailed. Overall, the unique traits of Actinosynnema pretiosum subsp. pretiosum strain ATCC 31280 highlight its potential significance in biotechnology and pharmacology, particularly for antibiotic development and understanding microbial interactions in ecosystems. Further research could elucidate its specific contributions to microbial ecology and bioprospecting efforts.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusActinosynnema
SpeciesActinosynnema pretiosum
Strainsubsp. pretiosum strain ATCC 31280

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Actinosynnema pretiosum subsp. pretiosum strain ATCC 31280

Gene Summary

Adenine Count

1099026 bp

Thymine Count

1099016 bp

Guanine Count

3067283 bp

Cytosine Count

3074941 bp

Genome Length

8340266 bp

Protein-coding Genes

7159 genes

Non-Coding Genes

111 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fad binding domain-containing proteinAPASM_RS13765Not AvailablePositive3059431 - 306021927818.5
molybdopterin-dependent oxidoreductaseAPASM_RS13770Not AvailablePositive3060219 - 306291293653.0
flavin-containing monooxygenaseAPASM_RS13775Not AvailableNegative3062902 - 306433552392.8
tetr/acrr family transcriptional regulatorAPASM_RS13780Not AvailablePositive3064501 - 306509121550.8
hypothetical proteinAPASM_RS13785Not AvailableNegative3065420 - 306611826360.8
ybab/ebfc family nucleoid-associated proteinAPASM_RS13790Not AvailableNegative3066115 - 306666919253.6
hypothetical proteinAPASM_RS13795Not AvailableNegative3066666 - 306716317622.1
putative t7ss-secreted proteinAPASM_RS13800Not AvailableNegative3067227 - 306855544045.0
hypothetical proteinAPASM_RS13805Not AvailableNegative3068552 - 306906716681.5
fadr/gntr family transcriptional regulatorAPASM_RS13810Not AvailableNegative3069304 - 307006827011.5

Displaying genes 2821 – 2830 of 7270 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.