Actinosynnema pretiosum subsp. pretiosum strain ATCC 31280

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Actinosynnema

Description

Actinosynnema pretiosum subsp. pretiosum strain ATCC 31280 is characterized by having a single replicon, which is a significant trait for its genetic stability and metabolic processes. The strain is documented under the accession number NZ_CP029607.1, providing a reference for researchers looking to access its genomic information. This strain is part of the Actinosynnema genus, which is known for producing bioactive compounds, including antibiotics. The genetic makeup indicated by its single replicon may suggest streamlined metabolic pathways, potentially facilitating efficient synthesis of secondary metabolites. The ecological role of Actinosynnema pretiosum subsp. pretiosum in its natural habitat likely involves interactions with other microorganisms and contributing to the soil microbiome's health, although specific ecological interactions are not detailed. Overall, the unique traits of Actinosynnema pretiosum subsp. pretiosum strain ATCC 31280 highlight its potential significance in biotechnology and pharmacology, particularly for antibiotic development and understanding microbial interactions in ecosystems. Further research could elucidate its specific contributions to microbial ecology and bioprospecting efforts.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusActinosynnema
SpeciesActinosynnema pretiosum
Strainsubsp. pretiosum strain ATCC 31280

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Actinosynnema pretiosum subsp. pretiosum strain ATCC 31280

Gene Summary

Adenine Count

1099026 bp

Thymine Count

1099016 bp

Guanine Count

3067283 bp

Cytosine Count

3074941 bp

Genome Length

8340266 bp

Protein-coding Genes

7159 genes

Non-Coding Genes

111 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
response regulator transcription factorAPASM_RS08985Not AvailableNegative1960443 - 196117427143.9
hypothetical proteinAPASM_RS08990Not AvailablePositive1961388 - 196209522668.6
copper resistance protein copcAPASM_RS08995Not AvailablePositive1962328 - 196295121313.1
g/u mismatch-specific dna glycosylaseAPASM_RS09000Not AvailablePositive1963235 - 196383720650.0
duf742 domain-containing proteinAPASM_RS09005Not AvailableNegative1963775 - 196460528931.9
rna-binding s4 domain-containing proteinAPASM_RS09010Not AvailablePositive1964724 - 19649999634.33
sugar transferaseAPASM_RS09015Not AvailablePositive1966266 - 196782256459.4
gfo/idh/moca family proteinAPASM_RS09020Not AvailablePositive1967843 - 196891638385.1
dtdp-4-dehydrorhamnose 3,5-epimeraseAPASM_RS09025Not AvailablePositive1968913 - 196951522246.2
sdr family nad(p)-dependent oxidoreductaseAPASM_RS09030Not AvailablePositive1969512 - 197048635280.0

Displaying genes 1871 – 1880 of 7270 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.