Deinococcus irradiatisoli strain 17bor-2

Kingdom

Thermotogati

Phylum

Deinococcota

Class

Deinococci

Order

Deinococcales

Family

Deinococcaceae

Genus

Deinococcus

Description

Deinococcus irradiatisoli strain 17bor-2 is a notable member of the Deinococcus genus, characterized by its presence of flagella, which suggests a degree of motility. This trait can play a crucial role in its ecological interactions and potential adaptability to various environments. The strain has a single replicon, indicating a streamlined genomic organization that may contribute to its efficiency in replication and stability under stressful conditions, such as exposure to radiation. The strain is cataloged under the accession number NZ_CP029494.1, which provides a reference for its genomic sequence and facilitates further research into its genetic makeup and characteristics. The presence of flagella and the single replicon are significant traits that can influence the organism's survival strategies, particularly in extreme environments where Deinococcus species are often found. Understanding the biological and ecological implications of these traits can enhance our knowledge of how Deinococcus irradiatisoli strain 17bor-2 interacts with its surroundings. The flagellar motility may allow it to navigate toward favorable conditions or away from harmful stimuli, while the single replicon might enable it to efficiently manage its resources in challenging habitats. Collectively, these traits contribute to the strain's resilience and adaptability, which are essential for its survival in environments that may include high levels of radiation or desiccation.

Taxonomy

KingdomThermotogati
PhylumDeinococcota
ClassDeinococci
OrderDeinococcales
FamilyDeinococcaceae
GenusDeinococcus
SpeciesDeinococcus irradiatisoli
Strainstrain 17bor-2

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Deinococcus irradiatisoli strain 17bor-2 chromosome, complete

Gene Summary

Adenine Count

501371 bp

Thymine Count

505190 bp

Guanine Count

1021504 bp

Cytosine Count

1023978 bp

Genome Length

3052043 bp

Protein-coding Genes

3025 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDKM44_RS14180Not AvailablePositive2871996 - 28721906800.69
nicotinate phosphoribosyltransferaseDKM44_RS14185Not AvailablePositive2872266 - 287365149934.2
adenylyltransferase/cytidyltransferase family proteinDKM44_RS14190Not AvailablePositive2873648 - 287451432126.6
cold-shock proteinDKM44_RS14195Not AvailablePositive2874653 - 28749169468.06
pas domain s-box proteinDKM44_RS14200Not AvailableNegative2874959 - 2878222119356.0
duf1905 domain-containing proteinDKM44_RS14205Not AvailablePositive2878370 - 287867811182.4
putative bifunctional diguanylate cyclase/phosphodiesteraseDKM44_RS14210Not AvailablePositive2878925 - 288129787964.2
fadr/gntr family transcriptional regulatorDKM44_RS14215Not AvailablePositive2881414 - 288216026684.2
abc transporter substrate-binding proteinDKM44_RS14220Not AvailablePositive2882153 - 288361652314.8
abc transporter permeaseDKM44_RS14225Not AvailablePositive2883701 - 288464533973.5

Displaying genes 2911 – 2920 of 3088 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.