Deinococcus irradiatisoli strain 17bor-2

Kingdom

Thermotogati

Phylum

Deinococcota

Class

Deinococci

Order

Deinococcales

Family

Deinococcaceae

Genus

Deinococcus

Description

Deinococcus irradiatisoli strain 17bor-2 is a notable member of the Deinococcus genus, characterized by its presence of flagella, which suggests a degree of motility. This trait can play a crucial role in its ecological interactions and potential adaptability to various environments. The strain has a single replicon, indicating a streamlined genomic organization that may contribute to its efficiency in replication and stability under stressful conditions, such as exposure to radiation. The strain is cataloged under the accession number NZ_CP029494.1, which provides a reference for its genomic sequence and facilitates further research into its genetic makeup and characteristics. The presence of flagella and the single replicon are significant traits that can influence the organism's survival strategies, particularly in extreme environments where Deinococcus species are often found. Understanding the biological and ecological implications of these traits can enhance our knowledge of how Deinococcus irradiatisoli strain 17bor-2 interacts with its surroundings. The flagellar motility may allow it to navigate toward favorable conditions or away from harmful stimuli, while the single replicon might enable it to efficiently manage its resources in challenging habitats. Collectively, these traits contribute to the strain's resilience and adaptability, which are essential for its survival in environments that may include high levels of radiation or desiccation.

Taxonomy

KingdomThermotogati
PhylumDeinococcota
ClassDeinococci
OrderDeinococcales
FamilyDeinococcaceae
GenusDeinococcus
SpeciesDeinococcus irradiatisoli
Strainstrain 17bor-2

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Deinococcus irradiatisoli strain 17bor-2 chromosome, complete

Gene Summary

Adenine Count

501371 bp

Thymine Count

505190 bp

Guanine Count

1021504 bp

Cytosine Count

1023978 bp

Genome Length

3052043 bp

Protein-coding Genes

3025 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fimbrial assembly proteinDKM44_RS13120Not AvailablePositive2661599 - 266228223663.7
type 4a pilus biogenesis protein piloDKM44_RS13125Not AvailablePositive2662279 - 266293223155.0
hypothetical proteinDKM44_RS13130Not AvailablePositive2662941 - 266460855694.6
type ii secretion system protein gspdDKM44_RS13135Not AvailablePositive2664612 - 266747998819.3
chorismate synthaseDKM44_RS13140Not AvailablePositive2667587 - 266874141226.3
shikimate kinaseDKM44_RS13145Not AvailablePositive2668900 - 266950522722.9
3-dehydroquinate synthaseDKM44_RS13150Not AvailablePositive2669492 - 267055937778.4
type ii 3-dehydroquinate dehydrataseDKM44_RS13155Not AvailablePositive2670603 - 267103715805.8
cation:proton antiporterDKM44_RS13160Not AvailablePositive2671061 - 267240747715.9
threonine--trna ligaseDKM44_RS13165Not AvailablePositive2672663 - 267461273278.9

Displaying genes 2691 – 2700 of 3088 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.