Deinococcus irradiatisoli strain 17bor-2

Kingdom

Thermotogati

Phylum

Deinococcota

Class

Deinococci

Order

Deinococcales

Family

Deinococcaceae

Genus

Deinococcus

Description

Deinococcus irradiatisoli strain 17bor-2 is a notable member of the Deinococcus genus, characterized by its presence of flagella, which suggests a degree of motility. This trait can play a crucial role in its ecological interactions and potential adaptability to various environments. The strain has a single replicon, indicating a streamlined genomic organization that may contribute to its efficiency in replication and stability under stressful conditions, such as exposure to radiation. The strain is cataloged under the accession number NZ_CP029494.1, which provides a reference for its genomic sequence and facilitates further research into its genetic makeup and characteristics. The presence of flagella and the single replicon are significant traits that can influence the organism's survival strategies, particularly in extreme environments where Deinococcus species are often found. Understanding the biological and ecological implications of these traits can enhance our knowledge of how Deinococcus irradiatisoli strain 17bor-2 interacts with its surroundings. The flagellar motility may allow it to navigate toward favorable conditions or away from harmful stimuli, while the single replicon might enable it to efficiently manage its resources in challenging habitats. Collectively, these traits contribute to the strain's resilience and adaptability, which are essential for its survival in environments that may include high levels of radiation or desiccation.

Taxonomy

KingdomThermotogati
PhylumDeinococcota
ClassDeinococci
OrderDeinococcales
FamilyDeinococcaceae
GenusDeinococcus
SpeciesDeinococcus irradiatisoli
Strainstrain 17bor-2

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Deinococcus irradiatisoli strain 17bor-2 chromosome, complete

Gene Summary

Adenine Count

501371 bp

Thymine Count

505190 bp

Guanine Count

1021504 bp

Cytosine Count

1023978 bp

Genome Length

3052043 bp

Protein-coding Genes

3025 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nicotinamide mononucleotide transporter family proteinDKM44_RS12035Not AvailableNegative2451171 - 245176122591.4
hypothetical proteinDKM44_RS12040Not AvailableNegative2451761 - 245242924556.9
nicotinate phosphoribosyltransferaseDKM44_RS12045Not AvailableNegative2452426 - 245383252107.8
bifunctional nicotinamide-nucleotide adenylyltransferase/nudix hydroxylaseDKM44_RS12050Not AvailableNegative2453877 - 245492039043.7
tcr/tet family mfs transporterDKM44_RS12055Not AvailablePositive2455035 - 245629143310.4
signal peptidase iDKM44_RS12060Not AvailablePositive2456327 - 245691121534.0
hypothetical proteinDKM44_RS12065Not AvailableNegative2456893 - 245737816946.8
isocitrate/isopropylmalate dehydrogenase family proteinDKM44_RS12070Not AvailableNegative2457484 - 245847935470.3
fad-dependent oxidoreductaseDKM44_RS12075Not AvailableNegative2458552 - 245951132597.4
trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmdDKM44_RS12080Not AvailableNegative2459508 - 246018823967.6

Displaying genes 2461 – 2470 of 3088 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.