Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein 1a | DFG54_RS04695 | Not Available | Negative | 1055016 - 1057442 | 88237.7 |
| pilus assembly protein pilm | DFG54_RS04700 | Not Available | Positive | 1057658 - 1058716 | 37622.4 |
| piln domain-containing protein | DFG54_RS04705 | Not Available | Positive | 1058716 - 1059486 | 27426.6 |
| type 4a pilus biogenesis protein pilo | DFG54_RS04710 | Not Available | Positive | 1059483 - 1060148 | 24548.7 |
| pilus assembly protein pilp | DFG54_RS04715 | Not Available | Positive | 1060145 - 1060678 | 19002.9 |
| type iv pilus secretin pilq | DFG54_RS04720 | Not Available | Positive | 1060698 - 1062644 | 68897.2 |
| aaa family atpase | DFG54_RS04725 | Not Available | Positive | 1062921 - 1063940 | 37501.3 |
| duf58 domain-containing protein | DFG54_RS04730 | Not Available | Positive | 1063961 - 1064932 | 34378.2 |
| duf4381 domain-containing protein | DFG54_RS04735 | Not Available | Positive | 1064929 - 1065384 | 16981.6 |
| vwa domain-containing protein | DFG54_RS04740 | Not Available | Positive | 1065381 - 1066388 | 37042.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

