Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminopeptidase p n-terminal domain-containing protein | DFG54_RS04540 | Not Available | Positive | 1023308 - 1024642 | 49376.5 |
| m91 family zinc metallopeptidase | DFG54_RS04545 | Not Available | Positive | 1024904 - 1025260 | 13060.7 |
| is5 family transposase | DFG54_RS04550 | Not Available | Negative | 1025247 - 1026045 | 30663.1 |
| glycerophosphodiester phosphodiesterase | DFG54_RS04555 | Not Available | Positive | 1026098 - 1026406 | 10975.8 |
| xaa-pro dipeptidase | DFG54_RS04560 | Not Available | Negative | 1026644 - 1027969 | 48253.4 |
| pilz domain-containing protein | DFG54_RS04565 | Not Available | Negative | 1028167 - 1028511 | 12833.5 |
| duf1631 domain-containing protein | DFG54_RS04570 | Not Available | Negative | 1028508 - 1030946 | 87079.3 |
| radical sam family heme chaperone hemw | DFG54_RS04575 | Not Available | Negative | 1031014 - 1032171 | 42735.5 |
| rdgb/ham1 family non-canonical purine ntp pyrophosphatase | DFG54_RS04580 | Not Available | Negative | 1032188 - 1032787 | 21013.3 |
| voc family protein | DFG54_RS04585 | Not Available | Negative | 1032784 - 1033176 | 14490.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

