Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | DFG54_RS04380 | Not Available | Positive | 989237 - 990595 | 48455.1 |
| lon peptidase substrate-binding domain-containing protein | DFG54_RS04385 | Not Available | Positive | 990610 - 991191 | 21296.6 |
| bestrophin family protein | DFG54_RS04390 | Not Available | Positive | 991333 - 992217 | 32703.1 |
| glycerophosphodiester phosphodiesterase | DFG54_RS04395 | Not Available | Negative | 992701 - 994683 | 73278.9 |
| serine/threonine-protein kinase | DFG54_RS04400 | Not Available | Positive | 994844 - 995503 | 25750.4 |
| sdr family oxidoreductase | DFG54_RS04405 | Not Available | Positive | 995629 - 996444 | 28128.1 |
| yiig family protein | DFG54_RS04410 | Not Available | Positive | 997077 - 998024 | 34698.8 |
| ion transporter | DFG54_RS04415 | Not Available | Negative | 998251 - 999123 | 32657.2 |
| acetylornithine transaminase | DFG54_RS04420 | Not Available | Positive | 999196 - 1000422 | 42976.7 |
| glycerophosphodiester phosphodiesterase | DFG54_RS04425 | Not Available | Negative | 1000808 - 1001426 | 21521.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

