Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gh92 family glycosyl hydrolase | DFG54_RS04115 | Not Available | Negative | 921788 - 925129 | 120395.0 |
| zinc-finger domain-containing protein | DFG54_RS04120 | Not Available | Positive | 925486 - 925683 | 7133.49 |
| glycosyltransferase | DFG54_RS04125 | Not Available | Positive | 925694 - 926806 | 40190.1 |
| o-antigen ligase family protein | DFG54_RS04130 | Not Available | Positive | 926787 - 928121 | 46983.4 |
| lpxl/lpxp family kdo(2)-lipid iv(a) lauroyl/palmitoleoyl acyltransferase | DFG54_RS04135 | Not Available | Negative | 928375 - 929295 | 35043.7 |
| lipid iv(a) 3-deoxy-d-manno-octulosonic acid transferase | DFG54_RS04140 | Not Available | Positive | 929726 - 931045 | 48773.0 |
| tolc family outer membrane protein | DFG54_RS04145 | Not Available | Negative | 931457 - 932830 | 49413.0 |
| protein-l-isoaspartate o-methyltransferase family protein | DFG54_RS04150 | Not Available | Negative | 932851 - 933507 | 24080.0 |
| tetr/acrr family transcriptional regulator | DFG54_RS04155 | Not Available | Negative | 933636 - 934289 | 23527.3 |
| ligand-binding sensor domain-containing diguanylate cyclase | DFG54_RS04160 | Not Available | Positive | 934550 - 937495 | 107224.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

