Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DFG54_RS03500 | Not Available | Positive | 776785 - 777429 | 24249.1 |
| zeta toxin family protein | DFG54_RS03505 | Not Available | Positive | 777426 - 780338 | 107281.0 |
| peptidoglycan-binding domain-containing protein | DFG54_RS23605 | Not Available | Positive | 780314 - 781084 | 27325.3 |
| is5-like element is1478 family transposase | DFG54_RS03515 | Not Available | Positive | 781191 - 782558 | 51779.1 |
| glycerophosphodiester phosphodiesterase | DFG54_RS03520 | Not Available | Positive | 782579 - 782779 | 7222.4 |
| glycoside hydrolase family 28 protein | DFG54_RS03525 | Not Available | Positive | 783136 - 784536 | 47455.1 |
| lytic murein transglycosylase b | DFG54_RS03530 | Not Available | Positive | 784891 - 786030 | 40896.8 |
| septal ring lytic transglycosylase rlpa family protein | DFG54_RS03535 | Not Available | Positive | 786027 - 787382 | 46480.1 |
| d-alanyl-d-alanine carboxypeptidase family protein | DFG54_RS03540 | Not Available | Positive | 787511 - 788722 | 43718.2 |
| lipid a deacylase lpxr family protein | DFG54_RS03545 | Not Available | Negative | 788845 - 789906 | 39318.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

