Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | DFG54_RS03345 | Not Available | Negative | 740823 - 741323 | 18227.0 |
| hlyd family secretion protein | DFG54_RS03350 | Not Available | Negative | 741349 - 742440 | 39321.7 |
| mfs transporter | DFG54_RS03355 | Not Available | Negative | 742437 - 744086 | 59407.7 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | DFG54_RS03360 | Not Available | Positive | 744174 - 744935 | 27967.6 |
| ggdef domain-containing protein | DFG54_RS03365 | Not Available | Positive | 745126 - 746016 | 32759.5 |
| m1 family metallopeptidase | DFG54_RS03370 | Not Available | Positive | 746091 - 748040 | 70993.3 |
| hypothetical protein | DFG54_RS03375 | Not Available | Positive | 748666 - 749385 | 25972.8 |
| had family hydrolase | DFG54_RS03380 | Not Available | Positive | 749389 - 750012 | 22075.4 |
| pqq-dependent dehydrogenase, methanol/ethanol family | DFG54_RS03385 | Not Available | Positive | 750851 - 752590 | 62891.3 |
| is3 family transposase | DFG54_RS03395 | Not Available | Positive | 752632 - 753776 | 43918.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

