Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xopx family type iii secretion system effector | DFG54_RS02660 | Not Available | Negative | 579174 - 581288 | 74558.1 |
| xopx family type iii secretion system effector | DFG54_RS02665 | Not Available | Negative | 581662 - 583635 | 70143.8 |
| tonb-dependent receptor plug domain-containing protein | DFG54_RS02670 | Not Available | Positive | 584069 - 586954 | 105801.0 |
| type ii toxin-antitoxin system hipa family toxin yjjj | DFG54_RS02675 | Not Available | Negative | 587026 - 588384 | 49787.0 |
| is3-like element isxca1 family transposase | DFG54_RS02680 | Not Available | Positive | 588522 - 589654 | 43330.0 |
| Ncrna_class:other | Not Available | Not Available | Positive | 589998 - 590072 | Not Available |
| 3-deoxy-7-phosphoheptulonate synthase | DFG54_RS02690 | Not Available | Positive | 590481 - 591554 | 38268.9 |
| hypothetical protein | DFG54_RS23210 | Not Available | Negative | 591998 - 592711 | 23432.7 |
| acetyl-coa hydrolase/transferase family protein | DFG54_RS02700 | Not Available | Negative | 592848 - 594362 | 55011.7 |
| hypothetical protein | DFG54_RS02705 | Not Available | Positive | 594530 - 596704 | 79206.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

