Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf808 domain-containing protein | DFG54_RS01975 | Not Available | Positive | 425957 - 426943 | 34279.6 |
| glycoside hydrolase family 10 protein | DFG54_RS01980 | Not Available | Positive | 427087 - 428463 | 50409.1 |
| ggdef domain-containing protein | DFG54_RS01985 | Not Available | Negative | 428460 - 430082 | 59025.2 |
| glycogen synthase glga | DFG54_RS01990 | Not Available | Positive | 430568 - 432154 | 56971.0 |
| 1,4-alpha-glucan branching enzyme | DFG54_RS01995 | Not Available | Positive | 432151 - 434385 | 81672.4 |
| malto-oligosyltrehalose trehalohydrolase | DFG54_RS02000 | Not Available | Positive | 434387 - 436144 | 64103.0 |
| 4-alpha-glucanotransferase | DFG54_RS02005 | Not Available | Positive | 436141 - 438072 | 68386.9 |
| malto-oligosyltrehalose synthase | DFG54_RS02010 | Not Available | Positive | 438069 - 440687 | 96380.8 |
| duf2934 domain-containing protein | DFG54_RS02015 | Not Available | Positive | 440684 - 440872 | 6847.96 |
| glycogen debranching protein glgx | DFG54_RS02020 | Not Available | Positive | 440915 - 443077 | 80859.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

