Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m56 family metallopeptidase | DFG54_RS23085 | Not Available | Positive | 5141308 - 5143020 | 60388.5 |
| hypothetical protein | DFG54_RS23490 | Not Available | Positive | 5143916 - 5144398 | 17033.4 |
| Ncrna_class:other | Not Available | Not Available | Positive | 5144460 - 5144536 | Not Available |
| saccharopine dehydrogenase nadp-binding domain-containing protein | DFG54_RS23105 | Not Available | Positive | 5144640 - 5145770 | 40660.3 |
| duf1868 domain-containing protein | DFG54_RS23110 | Not Available | Negative | 5146189 - 5146977 | 28617.2 |
| tonb-dependent receptor | DFG54_RS23115 | Not Available | Negative | 5146988 - 5149558 | 93703.9 |
| rok family protein | DFG54_RS23120 | Not Available | Positive | 5149757 - 5150914 | 40875.7 |
| type iii secretion system effector avirulence protein avrbs2 | DFG54_RS23125 | Not Available | Positive | 5151053 - 5153209 | 78523.8 |
| ribonuclease h-like domain-containing protein | DFG54_RS23130 | Not Available | Negative | 5153394 - 5154884 | 52541.6 |
| dead/deah box helicase | DFG54_RS23135 | Not Available | Negative | 5154881 - 5157376 | 90843.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

