Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhomboid family intramembrane serine protease | DFG54_RS22940 | Not Available | Positive | 5107179 - 5107871 | 25050.3 |
| duf1820 family protein | DFG54_RS22945 | Not Available | Positive | 5107900 - 5108220 | 12115.6 |
| d-2-hydroxyacid dehydrogenase family protein | DFG54_RS22950 | Not Available | Positive | 5108220 - 5109206 | 35814.0 |
| s41 family peptidase | DFG54_RS22955 | Not Available | Negative | 5110141 - 5111628 | 51557.0 |
| murein hydrolase activator envc family protein | DFG54_RS22960 | Not Available | Negative | 5111886 - 5113115 | 44147.5 |
| hypothetical protein | DFG54_RS22965 | Not Available | Positive | 5113274 - 5113930 | 22522.7 |
| m28 family metallopeptidase | DFG54_RS22970 | Not Available | Positive | 5113989 - 5115773 | 63137.5 |
| Ncrna_class:other | Not Available | Not Available | Positive | 5115942 - 5116016 | Not Available |
| pepsy domain-containing protein | DFG54_RS22980 | Not Available | Negative | 5116134 - 5116580 | 15785.4 |
| glycoside hydrolase family 5 protein | DFG54_RS22985 | Not Available | Negative | 5116998 - 5118047 | 38210.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

