Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein insertase yidc | DFG54_RS22830 | Not Available | Negative | 5083543 - 5085264 | 63347.9 |
| ribonuclease p protein component | DFG54_RS22835 | Not Available | Negative | 5085280 - 5085726 | 16326.8 |
| 50s ribosomal protein l34 | DFG54_RS22840 | Not Available | Negative | 5085765 - 5085905 | 5310.58 |
| chromosomal replication initiator protein dnaa | DFG54_RS22850 | Not Available | Positive | 5086148 - 5087476 | 49529.5 |
| dna polymerase iii subunit beta | DFG54_RS22855 | Not Available | Positive | 5087752 - 5088852 | 40746.9 |
| dna replication/repair protein recf | DFG54_RS22860 | Not Available | Positive | 5089739 - 5090845 | 40822.6 |
| dna topoisomerase (atp-hydrolyzing) subunit b | DFG54_RS22865 | Not Available | Positive | 5090959 - 5093403 | 89491.7 |
| cpbp family intramembrane glutamic endopeptidase | DFG54_RS22870 | Not Available | Positive | 5093471 - 5094307 | 29183.5 |
| m48 family metallopeptidase | DFG54_RS22875 | Not Available | Positive | 5094370 - 5095176 | 28488.9 |
| tetratricopeptide repeat protein | DFG54_RS22880 | Not Available | Positive | 5095315 - 5096511 | 43390.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

