Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhomboid family intramembrane serine protease | DFG54_RS22785 | Not Available | Positive | 5069456 - 5070244 | 28151.3 |
| glycerophosphodiester phosphodiesterase | DFG54_RS22790 | Not Available | Negative | 5070373 - 5070480 | 3762.49 |
| glycerophosphodiester phosphodiesterase | DFG54_RS22795 | Not Available | Negative | 5070621 - 5071721 | 39624.4 |
| hypothetical protein | DFG54_RS23850 | Not Available | Positive | 5071720 - 5071848 | 4838.66 |
| Ncrna_class:other | Not Available | Not Available | Positive | 5071867 - 5071941 | Not Available |
| tonb-dependent receptor | DFG54_RS22805 | Not Available | Negative | 5072116 - 5074431 | 83557.8 |
| acid phosphatase | DFG54_RS22810 | Not Available | Positive | 5074627 - 5075469 | 29658.4 |
| tonb-dependent receptor plug domain-containing protein | DFG54_RS22815 | Not Available | Positive | 5076249 - 5079293 | 111066.0 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | DFG54_RS22820 | Not Available | Negative | 5079385 - 5080725 | 47528.6 |
| polysaccharide deacetylase family protein | DFG54_RS22825 | Not Available | Negative | 5080748 - 5083453 | 97894.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

