Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DFG54_RS22495 | Not Available | Positive | 5001853 - 5002728 | 32509.7 |
| glycerophosphodiester phosphodiesterase | DFG54_RS23485 | Not Available | Negative | 5002826 - 5003277 | 17045.5 |
| glycerophosphodiester phosphodiesterase | DFG54_RS22505 | Not Available | Positive | 5003344 - 5003660 | 12085.7 |
| type iii secretion system leucine-rich repeat domain-containing effector xopl | DFG54_RS22510 | Not Available | Negative | 5003711 - 5005336 | 59970.1 |
| mlae family lipid abc transporter permease subunit | DFG54_RS22640 | Not Available | Positive | 5035878 - 5036627 | 26289.4 |
| outer membrane lipid asymmetry maintenance protein mlad | DFG54_RS22645 | Not Available | Positive | 5036736 - 5037278 | 18582.2 |
| phospholipid-binding protein mlac | DFG54_RS22650 | Not Available | Positive | 5037275 - 5037940 | 23546.1 |
| lipid asymmetry maintenance protein mlab | DFG54_RS22655 | Not Available | Positive | 5037930 - 5038223 | 10055.9 |
| vacj family lipoprotein | DFG54_RS22660 | Not Available | Positive | 5038235 - 5039299 | 37639.2 |
| glutathione peroxidase | DFG54_RS22670 | Not Available | Negative | 5040044 - 5040589 | 19321.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

