Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate dehydrogenase | DFG54_RS21260 | Not Available | Negative | 4693288 - 4694139 | 29705.2 |
| tolb family protein | DFG54_RS21265 | Not Available | Positive | 4694192 - 4695073 | 30044.4 |
| hypothetical protein | DFG54_RS23840 | Not Available | Positive | 4695307 - 4695441 | 4601.41 |
| pepsy domain-containing protein | DFG54_RS21270 | Not Available | Negative | 4695535 - 4698054 | 91913.9 |
| porphobilinogen synthase | DFG54_RS21275 | Not Available | Negative | 4698206 - 4699195 | 36449.7 |
| hypothetical protein | DFG54_RS21280 | Not Available | Negative | 4699283 - 4699525 | 8387.93 |
| hypothetical protein | DFG54_RS21285 | Not Available | Positive | 4699728 - 4700180 | 14907.0 |
| hypothetical protein | DFG54_RS21290 | Not Available | Positive | 4700432 - 4700785 | 12907.6 |
| duf885 domain-containing protein | DFG54_RS21295 | Not Available | Negative | 4700982 - 4702808 | 67166.4 |
| cytochrome c oxidase assembly factor 1 family protein | DFG54_RS21300 | Not Available | Negative | 4703011 - 4703556 | 18940.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

